Trees of Christmas 2016
This document describes the preprocessing steps performed before manually-guided tractography in the TractEM project. Code to perform the preprocessing may be found on github. Diffusion reconstructions were performed using DSI Studio. We began with a diffusion-weighted image set that had already been adjusted for head motion, eddy current effects, and distortion. For instance, the obtained HCP data sets were preprocessed as described by Glasser The DTI fractional isotropy image was registered to a Talairach space template image using an affine transformation.
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